Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.61■□□□□ 0.89
Irf9Q61179 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.61■□□□□ 0.89
Irf9Q61179 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.61■□□□□ 0.89
Irf9Q61179 Gm7461-201ENSMUST00000058918 827 ntBASIC20.61■□□□□ 0.89
Irf9Q61179 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Irf9Q61179 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Irf9Q61179 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Irf9Q61179 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Irf9Q61179 Gm27459-201ENSMUST00000184860 107 ntBASIC20.6■□□□□ 0.89
Irf9Q61179 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Irf9Q61179 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Irf9Q61179 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Irf9Q61179 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.59■□□□□ 0.89
Irf9Q61179 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.59■□□□□ 0.89
Irf9Q61179 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.59■□□□□ 0.89
Irf9Q61179 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.59■□□□□ 0.89
Irf9Q61179 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.59■□□□□ 0.89
Irf9Q61179 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Irf9Q61179 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Irf9Q61179 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Irf9Q61179 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Irf9Q61179 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Irf9Q61179 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.58■□□□□ 0.89
Irf9Q61179 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.58■□□□□ 0.89
Irf9Q61179 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Irf9Q61179 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.58■□□□□ 0.89
Irf9Q61179 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Irf9Q61179 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.58■□□□□ 0.88
Irf9Q61179 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf9Q61179 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf9Q61179 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Irf9Q61179 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Irf9Q61179 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.57■□□□□ 0.88
Irf9Q61179 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.57■□□□□ 0.88
Irf9Q61179 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Irf9Q61179 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Irf9Q61179 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Irf9Q61179 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.56■□□□□ 0.88
Irf9Q61179 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.56■□□□□ 0.88
Irf9Q61179 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Irf9Q61179 Gm43347-201ENSMUST00000200226 580 ntBASIC20.56■□□□□ 0.88
Irf9Q61179 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.56■□□□□ 0.88
Irf9Q61179 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Irf9Q61179 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms