Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ptch1Q61115 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC23.85■■□□□ 1.41
Ptch1Q61115 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ptch1Q61115 Gm13597-201ENSMUST00000121239 375 ntBASIC23.84■■□□□ 1.41
Ptch1Q61115 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC23.84■■□□□ 1.41
Ptch1Q61115 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC23.84■■□□□ 1.41
Ptch1Q61115 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC23.84■■□□□ 1.41
Ptch1Q61115 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ptch1Q61115 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptch1Q61115 AA543401-201ENSMUST00000164248 1269 ntBASIC23.84■■□□□ 1.41
Ptch1Q61115 Gm4899-201ENSMUST00000178708 719 ntBASIC23.84■■□□□ 1.41
Ptch1Q61115 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Ptch1Q61115 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ptch1Q61115 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ptch1Q61115 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ptch1Q61115 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Ptch1Q61115 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ptch1Q61115 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC23.82■■□□□ 1.4
Ptch1Q61115 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC23.82■■□□□ 1.4
Ptch1Q61115 Gm45167-201ENSMUST00000208007 322 ntBASIC23.82■■□□□ 1.4
Ptch1Q61115 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Ptch1Q61115 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptch1Q61115 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Ptch1Q61115 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Ptch1Q61115 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Ptch1Q61115 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC23.81■■□□□ 1.4
Ptch1Q61115 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC23.81■■□□□ 1.4
Ptch1Q61115 Gm18622-201ENSMUST00000219361 595 ntBASIC23.81■■□□□ 1.4
Ptch1Q61115 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
Ptch1Q61115 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptch1Q61115 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
Ptch1Q61115 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Gm2308-201ENSMUST00000166539 1004 ntBASIC23.8■■□□□ 1.4
Ptch1Q61115 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Ptch1Q61115 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC23.8■■□□□ 1.4
Ptch1Q61115 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptch1Q61115 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC23.79■■□□□ 1.4
Ptch1Q61115 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC23.79■■□□□ 1.4
Ptch1Q61115 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Ptch1Q61115 Gm36967-201ENSMUST00000193814 266 ntBASIC23.79■■□□□ 1.4
Ptch1Q61115 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ptch1Q61115 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptch1Q61115 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Gm6858-201ENSMUST00000208582 1468 ntBASIC23.78■■□□□ 1.4
Ptch1Q61115 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC23.78■■□□□ 1.4
Ptch1Q61115 Gm44492-201ENSMUST00000197012 141 ntBASIC23.78■■□□□ 1.4
Ptch1Q61115 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC23.78■■□□□ 1.4
Ptch1Q61115 AC154572.2-201ENSMUST00000225105 997 ntBASIC23.78■■□□□ 1.4
Ptch1Q61115 Gm16499-203ENSMUST00000204633 2177 ntBASIC23.78■■□□□ 1.4
Ptch1Q61115 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch1Q61115 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch1Q61115 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptch1Q61115 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms