Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Foxd3Q61060 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.24■□□□□ 0.03
Foxd3Q61060 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Foxd3Q61060 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.24■□□□□ 0.03
Foxd3Q61060 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.24■□□□□ 0.03
Foxd3Q61060 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.24■□□□□ 0.03
Foxd3Q61060 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Foxd3Q61060 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.23■□□□□ 0.03
Foxd3Q61060 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.23■□□□□ 0.03
Foxd3Q61060 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Foxd3Q61060 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Foxd3Q61060 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.22■□□□□ 0.03
Foxd3Q61060 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Gm37025-201ENSMUST00000195159 829 ntBASIC15.22■□□□□ 0.03
Foxd3Q61060 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.22■□□□□ 0.03
Foxd3Q61060 Gm30025-201ENSMUST00000218555 728 ntBASIC15.22■□□□□ 0.03
Foxd3Q61060 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxd3Q61060 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxd3Q61060 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Foxd3Q61060 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Foxd3Q61060 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.21■□□□□ 0.03
Foxd3Q61060 Gm12085-201ENSMUST00000119263 940 ntBASIC15.21■□□□□ 0.03
Foxd3Q61060 Gm11539-201ENSMUST00000119837 557 ntBASIC15.21■□□□□ 0.03
Foxd3Q61060 Gm13436-201ENSMUST00000120418 567 ntBASIC15.21■□□□□ 0.03
Foxd3Q61060 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.21■□□□□ 0.03
Foxd3Q61060 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Foxd3Q61060 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxd3Q61060 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Foxd3Q61060 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Foxd3Q61060 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms