Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col12a1Q60847 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Col12a1Q60847 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.35■□□□□ 0.21
Col12a1Q60847 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col12a1Q60847 Mir7023-201ENSMUST00000185093 64 ntBASIC16.35■□□□□ 0.21
Col12a1Q60847 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col12a1Q60847 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.34■□□□□ 0.21
Col12a1Q60847 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.34■□□□□ 0.21
Col12a1Q60847 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Gm27494-201ENSMUST00000184735 189 ntBASIC16.34■□□□□ 0.21
Col12a1Q60847 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col12a1Q60847 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col12a1Q60847 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col12a1Q60847 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Col12a1Q60847 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Col12a1Q60847 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
Col12a1Q60847 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.33■□□□□ 0.21
Col12a1Q60847 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.33■□□□□ 0.21
Col12a1Q60847 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.33■□□□□ 0.2
Col12a1Q60847 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col12a1Q60847 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col12a1Q60847 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.33■□□□□ 0.2
Col12a1Q60847 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col12a1Q60847 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.32■□□□□ 0.2
Col12a1Q60847 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.32■□□□□ 0.2
Col12a1Q60847 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col12a1Q60847 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col12a1Q60847 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Gm27300-201ENSMUST00000184085 97 ntBASIC16.31■□□□□ 0.2
Col12a1Q60847 Gm27335-201ENSMUST00000184758 97 ntBASIC16.31■□□□□ 0.2
Col12a1Q60847 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.31■□□□□ 0.2
Col12a1Q60847 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.31■□□□□ 0.2
Col12a1Q60847 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col12a1Q60847 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Col12a1Q60847 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col12a1Q60847 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm14127-201ENSMUST00000117906 678 ntBASIC16.3■□□□□ 0.2
Col12a1Q60847 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col12a1Q60847 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col12a1Q60847 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms