Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Gm15165-201ENSMUST00000118140 502 ntBASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-2Q5R1I4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-2Q5R1I4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-2Q5R1I4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms