Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-3Q5R1I1 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.21□□□□□ -0.46
Trav7d-3Q5R1I1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-3Q5R1I1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7d-3Q5R1I1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gm10698-201ENSMUST00000182663 604 ntBASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7d-3Q5R1I1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms