Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav5d-4Q5R1F6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav5d-4Q5R1F6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav5d-4Q5R1F6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5d-4Q5R1F6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms