Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3hdm4Q4VBF2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3hdm4Q4VBF2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3hdm4Q4VBF2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3hdm4Q4VBF2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3hdm4Q4VBF2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
R3hdm4Q4VBF2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
R3hdm4Q4VBF2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.89■□□□□ 0.46
R3hdm4Q4VBF2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3hdm4Q4VBF2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3hdm4Q4VBF2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Gm11950-201ENSMUST00000121615 838 ntBASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
R3hdm4Q4VBF2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.86■□□□□ 0.45
R3hdm4Q4VBF2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3hdm4Q4VBF2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.85■□□□□ 0.45
R3hdm4Q4VBF2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3hdm4Q4VBF2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3hdm4Q4VBF2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
R3hdm4Q4VBF2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms