Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Nudt18-203ENSMUST00000228768 1578 ntBASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Herc2Q4U2R1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm11453-201ENSMUST00000117318 1007 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm13453-201ENSMUST00000118708 357 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm9194-201ENSMUST00000220749 1447 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm43125-201ENSMUST00000201724 730 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Syt7-205ENSMUST00000224135 1557 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Ddx41-204ENSMUST00000224765 2199 ntBASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc2Q4U2R1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Mir1247-201ENSMUST00000116706 82 ntBASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc2Q4U2R1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm14719-201ENSMUST00000121891 340 ntBASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms