Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38aQ4FK66 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Rprl3-201ENSMUST00000157400 290 ntBASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38aQ4FK66 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38aQ4FK66 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Gm27459-201ENSMUST00000184860 107 ntBASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38aQ4FK66 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38aQ4FK66 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Gm7461-201ENSMUST00000058918 827 ntBASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Prpf38aQ4FK66 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms