Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf223Q3UV31 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf223Q3UV31 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Gm12895-201ENSMUST00000122214 226 ntBASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf223Q3UV31 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.04■□□□□ 0.16
Rnf223Q3UV31 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf223Q3UV31 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Gm7153-201ENSMUST00000117092 455 ntBASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf223Q3UV31 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms