Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Brd9Q3UQU0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brd9Q3UQU0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.49■□□□□ 0.55
Brd9Q3UQU0 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Brd9Q3UQU0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.48■□□□□ 0.55
Brd9Q3UQU0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Brd9Q3UQU0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brd9Q3UQU0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brd9Q3UQU0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms