Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cks1brtQ3UNC9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cks1brtQ3UNC9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cks1brtQ3UNC9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Gm10710-201ENSMUST00000047876 3971 ntBASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Gm38205-201ENSMUST00000192243 258 ntBASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cks1brtQ3UNC9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1brtQ3UNC9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cks1brtQ3UNC9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cks1brtQ3UNC9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cks1brtQ3UNC9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms