Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gm27306-201ENSMUST00000183970 107 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gm6007-201ENSMUST00000208170 823 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gm15427-201ENSMUST00000117288 531 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Gm27301-201ENSMUST00000184012 127 ntBASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Spg11Q3UHA3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Mir8112-201ENSMUST00000184382 131 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm44719-201ENSMUST00000206404 149 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm6912-201ENSMUST00000117218 544 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm13223-201ENSMUST00000118609 747 ntBASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Spg11Q3UHA3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Spg11Q3UHA3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms