Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf180Q3U827 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Gm6912-201ENSMUST00000117218 544 ntBASIC19.46■□□□□ 0.71
Rnf180Q3U827 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.46■□□□□ 0.71
Rnf180Q3U827 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Gm45747-201ENSMUST00000212203 999 ntBASIC19.46■□□□□ 0.71
Rnf180Q3U827 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.46■□□□□ 0.71
Rnf180Q3U827 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf180Q3U827 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.46■□□□□ 0.71
Rnf180Q3U827 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Gm7787-201ENSMUST00000216858 688 ntBASIC19.45■□□□□ 0.7
Rnf180Q3U827 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf180Q3U827 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.44■□□□□ 0.7
Rnf180Q3U827 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Mir1938-201ENSMUST00000158746 100 ntBASIC19.44■□□□□ 0.7
Rnf180Q3U827 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Gm18622-201ENSMUST00000219361 595 ntBASIC19.44■□□□□ 0.7
Rnf180Q3U827 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf180Q3U827 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22065-201ENSMUST00000103753 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22066-201ENSMUST00000103761 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm24932-201ENSMUST00000103763 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm24115-201ENSMUST00000103799 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22190-201ENSMUST00000103827 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22191-201ENSMUST00000103831 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm24721-201ENSMUST00000103849 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm28018-201ENSMUST00000103869 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm26399-201ENSMUST00000103937 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm13597-201ENSMUST00000121239 375 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf180Q3U827 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm25349-201ENSMUST00000177728 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm23616-201ENSMUST00000177797 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm25871-201ENSMUST00000177816 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm24752-201ENSMUST00000178240 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm24496-201ENSMUST00000178287 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm25649-201ENSMUST00000178476 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm25548-201ENSMUST00000178681 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm23147-201ENSMUST00000178841 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm26095-201ENSMUST00000179270 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22171-201ENSMUST00000179283 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm23936-201ENSMUST00000179354 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm22619-201ENSMUST00000179516 110 ntBASIC19.43■□□□□ 0.7
Rnf180Q3U827 Gm25255-201ENSMUST00000179579 110 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms