Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Gm10576-201ENSMUST00000191927 825 ntBASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim7Q3TJD7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Gm9727-201ENSMUST00000161387 555 ntBASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 AV026068-213ENSMUST00000223675 1171 ntBASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim7Q3TJD7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pdlim7Q3TJD7 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.58■□□□□ 0.57
Pdlim7Q3TJD7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim7Q3TJD7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim7Q3TJD7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pdlim7Q3TJD7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim7Q3TJD7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Gm6550-201ENSMUST00000187574 993 ntBASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim7Q3TJD7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm6089-201ENSMUST00000197666 938 ntBASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim7Q3TJD7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms