Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Q3KNL4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.33■□□□□ 0.2
Q3KNL4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.33■□□□□ 0.2
Q3KNL4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q3KNL4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.32■□□□□ 0.2
Q3KNL4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.32■□□□□ 0.2
Q3KNL4 Gm7638-201ENSMUST00000121348 967 ntBASIC16.32■□□□□ 0.2
Q3KNL4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Q3KNL4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Gm18958-201ENSMUST00000174258 762 ntBASIC16.32■□□□□ 0.2
Q3KNL4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Q3KNL4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q3KNL4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.31■□□□□ 0.2
Q3KNL4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Q3KNL4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Q3KNL4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q3KNL4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q3KNL4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Q3KNL4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Q3KNL4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.3■□□□□ 0.2
Q3KNL4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.3■□□□□ 0.2
Q3KNL4 Mir1199-201ENSMUST00000117015 119 ntBASIC16.3■□□□□ 0.2
Q3KNL4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Gm38027-201ENSMUST00000192315 235 ntBASIC16.3■□□□□ 0.2
Q3KNL4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Q3KNL4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Q3KNL4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.3■□□□□ 0.2
Q3KNL4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q3KNL4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.29■□□□□ 0.2
Q3KNL4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Q3KNL4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Q3KNL4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Gm13168-201ENSMUST00000121771 632 ntBASIC16.29■□□□□ 0.2
Q3KNL4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.29■□□□□ 0.2
Q3KNL4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.29■□□□□ 0.2
Q3KNL4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms