Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Gm21559-201ENSMUST00000220638 855 ntBASIC17.7■□□□□ 0.42
Trim72Q1XH17 Gm18032-201ENSMUST00000222541 538 ntBASIC17.7■□□□□ 0.42
Trim72Q1XH17 Gm8587-201ENSMUST00000076538 843 ntBASIC17.7■□□□□ 0.42
Trim72Q1XH17 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim72Q1XH17 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Gm29707-201ENSMUST00000196325 491 ntBASIC17.69■□□□□ 0.42
Trim72Q1XH17 Gm18421-201ENSMUST00000204122 625 ntBASIC17.69■□□□□ 0.42
Trim72Q1XH17 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim72Q1XH17 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim72Q1XH17 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.67■□□□□ 0.42
Trim72Q1XH17 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim72Q1XH17 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Gm10013-201ENSMUST00000106074 672 ntBASIC17.66■□□□□ 0.42
Trim72Q1XH17 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim72Q1XH17 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms