Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.66■□□□□ 0.42
Col19a1Q0VF58 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col19a1Q0VF58 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.64■□□□□ 0.42
Col19a1Q0VF58 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col19a1Q0VF58 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.63■□□□□ 0.41
Col19a1Q0VF58 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.63■□□□□ 0.41
Col19a1Q0VF58 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col19a1Q0VF58 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Gm27646-201ENSMUST00000183989 110 ntBASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.62■□□□□ 0.41
Col19a1Q0VF58 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col19a1Q0VF58 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.61■□□□□ 0.41
Col19a1Q0VF58 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms