Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptchd3Q0EEE2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptchd3Q0EEE2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Gm13168-201ENSMUST00000121771 632 ntBASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Gm37292-201ENSMUST00000192062 758 ntBASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptchd3Q0EEE2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Gm43183-201ENSMUST00000200632 547 ntBASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptchd3Q0EEE2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Gm27011-201ENSMUST00000182352 972 ntBASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Gm10698-201ENSMUST00000182663 604 ntBASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptchd3Q0EEE2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms