Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd8Q09XV5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm44855-201ENSMUST00000205725 362 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm4459-201ENSMUST00000118750 468 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Gm27618-201ENSMUST00000183671 60 ntBASIC14.8□□□□□ -0.04
Chd8Q09XV5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chd8Q09XV5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm27300-201ENSMUST00000184085 97 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm27335-201ENSMUST00000184758 97 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm6180-201ENSMUST00000065243 498 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm25287-201ENSMUST00000103846 110 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm22918-201ENSMUST00000103855 110 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm13453-201ENSMUST00000118708 357 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm11425-201ENSMUST00000119608 498 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chd8Q09XV5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.79□□□□□ -0.04
Chd8Q09XV5 Gm9396-201ENSMUST00000076703 567 ntBASIC14.79□□□□□ -0.04
Chd8Q09XV5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm29791-202ENSMUST00000207888 369 ntBASIC14.78□□□□□ -0.04
Chd8Q09XV5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm14719-201ENSMUST00000121891 340 ntBASIC14.78□□□□□ -0.04
Chd8Q09XV5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chd8Q09XV5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Chd8Q09XV5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.77□□□□□ -0.04
Chd8Q09XV5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Gm27646-201ENSMUST00000183989 110 ntBASIC14.77□□□□□ -0.04
Chd8Q09XV5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chd8Q09XV5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms