Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tff1Q08423 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tff1Q08423 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tff1Q08423 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Tff1Q08423 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.81□□□□□ -0.2
Tff1Q08423 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.81□□□□□ -0.2
Tff1Q08423 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Gm4974-201ENSMUST00000209974 875 ntBASIC13.81□□□□□ -0.2
Tff1Q08423 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tff1Q08423 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tff1Q08423 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tff1Q08423 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tff1Q08423 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.8□□□□□ -0.2
Tff1Q08423 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tff1Q08423 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tff1Q08423 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.79□□□□□ -0.2
Tff1Q08423 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tff1Q08423 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tff1Q08423 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.79□□□□□ -0.2
Tff1Q08423 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.79□□□□□ -0.2
Tff1Q08423 Gm43183-201ENSMUST00000200632 547 ntBASIC13.79□□□□□ -0.2
Tff1Q08423 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.79□□□□□ -0.2
Tff1Q08423 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Tff1Q08423 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tff1Q08423 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Tff1Q08423 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tff1Q08423 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tff1Q08423 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tff1Q08423 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tff1Q08423 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms