Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.19□□□□□ -0.46
Hspg2Q05793 Gm11780-201ENSMUST00000136880 516 ntBASIC12.19□□□□□ -0.46
Hspg2Q05793 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.19□□□□□ -0.46
Hspg2Q05793 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Hspg2Q05793 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hspg2Q05793 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.18□□□□□ -0.46
Hspg2Q05793 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.18□□□□□ -0.46
Hspg2Q05793 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Hspg2Q05793 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hspg2Q05793 Gm27646-201ENSMUST00000183989 110 ntBASIC12.18□□□□□ -0.46
Hspg2Q05793 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.17□□□□□ -0.46
Hspg2Q05793 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.17□□□□□ -0.46
Hspg2Q05793 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.17□□□□□ -0.46
Hspg2Q05793 Gm20949-201ENSMUST00000206478 952 ntBASIC12.17□□□□□ -0.46
Hspg2Q05793 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.17□□□□□ -0.46
Hspg2Q05793 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.17□□□□□ -0.46
Hspg2Q05793 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hspg2Q05793 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hspg2Q05793 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.16□□□□□ -0.46
Hspg2Q05793 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hspg2Q05793 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.16□□□□□ -0.46
Hspg2Q05793 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms