Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.95□□□□□ -0.18
Npas1P97459 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Npas1P97459 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Npas1P97459 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Npas1P97459 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.94□□□□□ -0.18
Npas1P97459 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Npas1P97459 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.94□□□□□ -0.18
Npas1P97459 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.94□□□□□ -0.18
Npas1P97459 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.94□□□□□ -0.18
Npas1P97459 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npas1P97459 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.93□□□□□ -0.18
Npas1P97459 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Npas1P97459 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.93□□□□□ -0.18
Npas1P97459 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Npas1P97459 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Npas1P97459 Gm6211-202ENSMUST00000167849 925 ntBASIC13.93□□□□□ -0.18
Npas1P97459 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.93□□□□□ -0.18
Npas1P97459 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.93□□□□□ -0.18
Npas1P97459 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npas1P97459 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Npas1P97459 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.92□□□□□ -0.18
Npas1P97459 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Npas1P97459 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Npas1P97459 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Npas1P97459 Gm44549-201ENSMUST00000208351 577 ntBASIC13.92□□□□□ -0.18
Npas1P97459 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Npas1P97459 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Npas1P97459 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Npas1P97459 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms