Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm11780-201ENSMUST00000136880 516 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm5364-201ENSMUST00000216789 889 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.85■□□□□ 0.93
Nkx2-3P97334 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-3P97334 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Gm11779-201ENSMUST00000118541 368 ntBASIC20.84■□□□□ 0.93
Nkx2-3P97334 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx2-3P97334 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.83■□□□□ 0.93
Nkx2-3P97334 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.83■□□□□ 0.93
Nkx2-3P97334 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx2-3P97334 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx2-3P97334 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx2-3P97334 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.83■□□□□ 0.92
Nkx2-3P97334 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx2-3P97334 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm4535-201ENSMUST00000182274 558 ntBASIC20.82■□□□□ 0.92
Nkx2-3P97334 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm10355-201ENSMUST00000097146 517 ntBASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-3P97334 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Gm4459-201ENSMUST00000118750 468 ntBASIC20.81■□□□□ 0.92
Nkx2-3P97334 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx2-3P97334 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.8■□□□□ 0.92
Nkx2-3P97334 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Gm4995-201ENSMUST00000117247 432 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms