Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim43bP86448 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim43bP86448 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim43bP86448 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim43bP86448 Gm15565-201ENSMUST00000118890 427 ntBASIC17.07■□□□□ 0.32
Trim43bP86448 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.07■□□□□ 0.32
Trim43bP86448 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43bP86448 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Trim43bP86448 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim43bP86448 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim43bP86448 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim43bP86448 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43bP86448 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43bP86448 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim43bP86448 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim43bP86448 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Trim43bP86448 Gm6433-201ENSMUST00000118634 875 ntBASIC17.05■□□□□ 0.32
Trim43bP86448 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim43bP86448 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim43bP86448 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Gm3375-201ENSMUST00000203929 796 ntBASIC17.05■□□□□ 0.32
Trim43bP86448 Gm30025-201ENSMUST00000218555 728 ntBASIC17.05■□□□□ 0.32
Trim43bP86448 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Trim43bP86448 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim43bP86448 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim43bP86448 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim43bP86448 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43bP86448 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43bP86448 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim43bP86448 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim43bP86448 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim43bP86448 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.04■□□□□ 0.32
Trim43bP86448 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim43bP86448 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim43bP86448 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim43bP86448 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim43bP86448 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim43bP86448 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim43bP86448 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim43bP86448 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.03■□□□□ 0.32
Trim43bP86448 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms