Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SgcaP82350 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.95□□□□□ -0.18
SgcaP82350 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.95□□□□□ -0.18
SgcaP82350 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SgcaP82350 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.95□□□□□ -0.18
SgcaP82350 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SgcaP82350 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.95□□□□□ -0.18
SgcaP82350 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcaP82350 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
SgcaP82350 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Mir2861-201ENSMUST00000175539 82 ntBASIC13.94□□□□□ -0.18
SgcaP82350 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.94□□□□□ -0.18
SgcaP82350 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SgcaP82350 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcaP82350 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Flg-201ENSMUST00000050758 1488 ntBASIC13.93□□□□□ -0.18
SgcaP82350 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SgcaP82350 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.93□□□□□ -0.18
SgcaP82350 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.93□□□□□ -0.18
SgcaP82350 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.93□□□□□ -0.18
SgcaP82350 Gm7291-201ENSMUST00000199147 382 ntBASIC13.93□□□□□ -0.18
SgcaP82350 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.93□□□□□ -0.18
SgcaP82350 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SgcaP82350 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcaP82350 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.92□□□□□ -0.18
SgcaP82350 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SgcaP82350 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SgcaP82350 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SgcaP82350 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.92□□□□□ -0.18
SgcaP82350 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SgcaP82350 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SgcaP82350 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms