Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pdlim4P70271 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.81□□□□□ -0.2
Pdlim4P70271 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.81□□□□□ -0.2
Pdlim4P70271 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim4P70271 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim4P70271 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pdlim4P70271 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.8□□□□□ -0.2
Pdlim4P70271 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pdlim4P70271 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pdlim4P70271 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pdlim4P70271 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.79□□□□□ -0.2
Pdlim4P70271 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Gm7213-201ENSMUST00000215977 950 ntBASIC13.79□□□□□ -0.2
Pdlim4P70271 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pdlim4P70271 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.79□□□□□ -0.2
Pdlim4P70271 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pdlim4P70271 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim4P70271 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Pdlim4P70271 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.78□□□□□ -0.2
Pdlim4P70271 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.78□□□□□ -0.2
Pdlim4P70271 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm10231-201ENSMUST00000181584 441 ntBASIC13.78□□□□□ -0.2
Pdlim4P70271 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm10175-202ENSMUST00000208752 441 ntBASIC13.78□□□□□ -0.2
Pdlim4P70271 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.78□□□□□ -0.2
Pdlim4P70271 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.78□□□□□ -0.2
Pdlim4P70271 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.78□□□□□ -0.2
Pdlim4P70271 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pdlim4P70271 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim4P70271 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim4P70271 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.78□□□□□ -0.2
Pdlim4P70271 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.77□□□□□ -0.2
Pdlim4P70271 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim4P70271 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.77□□□□□ -0.2
Pdlim4P70271 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms