Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44357-201ENSMUST00000195897 142 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm19658-201ENSMUST00000196231 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44367-201ENSMUST00000196836 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44350-201ENSMUST00000197197 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44390-201ENSMUST00000197533 144 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44313-201ENSMUST00000198018 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44486-201ENSMUST00000198508 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44454-201ENSMUST00000198541 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44314-201ENSMUST00000199263 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44394-201ENSMUST00000199558 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44484-201ENSMUST00000199873 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44466-201ENSMUST00000200264 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm44359-201ENSMUST00000200671 138 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm18195-201ENSMUST00000207604 706 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.96■□□□□ 0.31
Ybx1P62960 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ybx1P62960 Rps4l-201ENSMUST00000071745 943 ntBASIC16.96■□□□□ 0.31
Ybx1P62960 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ybx1P62960 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Ybx1P62960 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Ybx1P62960 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ybx1P62960 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ybx1P62960 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ybx1P62960 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ybx1P62960 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ybx1P62960 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ybx1P62960 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ybx1P62960 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.95■□□□□ 0.3
Ybx1P62960 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Rprl3-201ENSMUST00000157400 290 ntBASIC16.95■□□□□ 0.3
Ybx1P62960 Gm2651-201ENSMUST00000203560 838 ntBASIC16.95■□□□□ 0.3
Ybx1P62960 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.95■□□□□ 0.3
Ybx1P62960 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ybx1P62960 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ybx1P62960 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.95■□□□□ 0.3
Ybx1P62960 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.95■□□□□ 0.3
Ybx1P62960 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ybx1P62960 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.94■□□□□ 0.3
Ybx1P62960 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.94■□□□□ 0.3
Ybx1P62960 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.94■□□□□ 0.3
Ybx1P62960 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.94■□□□□ 0.3
Ybx1P62960 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ybx1P62960 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.94■□□□□ 0.3
Ybx1P62960 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ybx1P62960 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ybx1P62960 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ybx1P62960 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Gm15165-201ENSMUST00000118140 502 ntBASIC16.93■□□□□ 0.3
Ybx1P62960 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.93■□□□□ 0.3
Ybx1P62960 Gm18206-201ENSMUST00000207027 926 ntBASIC16.93■□□□□ 0.3
Ybx1P62960 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.93■□□□□ 0.3
Ybx1P62960 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ybx1P62960 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ybx1P62960 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ybx1P62960 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Ybx1P62960 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ybx1P62960 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms