Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nup43P59235 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nup43P59235 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.68■□□□□ 0.1
Nup43P59235 Gm6659-201ENSMUST00000174752 547 ntBASIC15.68■□□□□ 0.1
Nup43P59235 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup43P59235 Gm44450-201ENSMUST00000199528 114 ntBASIC15.68■□□□□ 0.1
Nup43P59235 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nup43P59235 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup43P59235 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup43P59235 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup43P59235 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Nup43P59235 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nup43P59235 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup43P59235 Gm37722-201ENSMUST00000193757 208 ntBASIC15.67■□□□□ 0.1
Nup43P59235 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.67■□□□□ 0.1
Nup43P59235 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nup43P59235 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup43P59235 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup43P59235 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup43P59235 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.66■□□□□ 0.1
Nup43P59235 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.66■□□□□ 0.1
Nup43P59235 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup43P59235 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nup43P59235 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup43P59235 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.65■□□□□ 0.1
Nup43P59235 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup43P59235 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup43P59235 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup43P59235 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup43P59235 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.65■□□□□ 0.1
Nup43P59235 Gm9013-201ENSMUST00000132939 882 ntBASIC15.65■□□□□ 0.1
Nup43P59235 Gm23634-201ENSMUST00000175071 91 ntBASIC15.65■□□□□ 0.1
Nup43P59235 Gm18421-201ENSMUST00000204122 625 ntBASIC15.65■□□□□ 0.1
Nup43P59235 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup43P59235 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.65■□□□□ 0.1
Nup43P59235 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
Nup43P59235 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.64■□□□□ 0.09
Nup43P59235 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nup43P59235 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup43P59235 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup43P59235 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms