Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.47■□□□□ 0.39
NcanP55066 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.47■□□□□ 0.39
NcanP55066 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.47■□□□□ 0.39
NcanP55066 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.47■□□□□ 0.39
NcanP55066 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NcanP55066 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NcanP55066 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NcanP55066 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NcanP55066 Gm5682-201ENSMUST00000173402 505 ntBASIC17.46■□□□□ 0.39
NcanP55066 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.46■□□□□ 0.39
NcanP55066 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NcanP55066 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NcanP55066 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.46■□□□□ 0.39
NcanP55066 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NcanP55066 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NcanP55066 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.45■□□□□ 0.38
NcanP55066 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.45■□□□□ 0.38
NcanP55066 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.45■□□□□ 0.38
NcanP55066 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NcanP55066 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.45■□□□□ 0.38
NcanP55066 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NcanP55066 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NcanP55066 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.44■□□□□ 0.38
NcanP55066 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.44■□□□□ 0.38
NcanP55066 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.44■□□□□ 0.38
NcanP55066 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.44■□□□□ 0.38
NcanP55066 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.44■□□□□ 0.38
NcanP55066 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.44■□□□□ 0.38
NcanP55066 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.44■□□□□ 0.38
NcanP55066 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NcanP55066 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.44■□□□□ 0.38
NcanP55066 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NcanP55066 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NcanP55066 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.43■□□□□ 0.38
NcanP55066 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.43■□□□□ 0.38
NcanP55066 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NcanP55066 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NcanP55066 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NcanP55066 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NcanP55066 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NcanP55066 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms