Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ddx6P54823 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx6P54823 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx6P54823 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ddx6P54823 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx6P54823 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx6P54823 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx6P54823 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx6P54823 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Gm18733-201ENSMUST00000173950 856 ntBASIC16.83■□□□□ 0.28
Ddx6P54823 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx6P54823 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Gm6443-201ENSMUST00000203599 874 ntBASIC16.83■□□□□ 0.28
Ddx6P54823 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx6P54823 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx6P54823 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ddx6P54823 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Ddx6P54823 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx6P54823 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx6P54823 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx6P54823 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.82■□□□□ 0.28
Ddx6P54823 Gm43514-201ENSMUST00000198852 424 ntBASIC16.82■□□□□ 0.28
Ddx6P54823 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx6P54823 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx6P54823 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx6P54823 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx6P54823 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx6P54823 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx6P54823 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.81■□□□□ 0.28
Ddx6P54823 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx6P54823 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx6P54823 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx6P54823 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
Ddx6P54823 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ddx6P54823 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.8■□□□□ 0.28
Ddx6P54823 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.8■□□□□ 0.28
Ddx6P54823 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.8■□□□□ 0.28
Ddx6P54823 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx6P54823 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx6P54823 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx6P54823 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ddx6P54823 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ddx6P54823 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.79■□□□□ 0.28
Ddx6P54823 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ddx6P54823 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms