Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.5■□□□□ 0.87
Rad23bP54728 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.5■□□□□ 0.87
Rad23bP54728 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rad23bP54728 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Rad23bP54728 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rad23bP54728 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rad23bP54728 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rad23bP54728 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.49■□□□□ 0.87
Rad23bP54728 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rad23bP54728 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.49■□□□□ 0.87
Rad23bP54728 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Rad23bP54728 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.49■□□□□ 0.87
Rad23bP54728 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.49■□□□□ 0.87
Rad23bP54728 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rad23bP54728 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.49■□□□□ 0.87
Rad23bP54728 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rad23bP54728 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.48■□□□□ 0.87
Rad23bP54728 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.48■□□□□ 0.87
Rad23bP54728 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rad23bP54728 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rad23bP54728 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rad23bP54728 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rad23bP54728 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rad23bP54728 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Rad23bP54728 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rad23bP54728 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.47■□□□□ 0.87
Rad23bP54728 Gm29707-201ENSMUST00000196325 491 ntBASIC20.47■□□□□ 0.87
Rad23bP54728 Gm20949-201ENSMUST00000206478 952 ntBASIC20.47■□□□□ 0.87
Rad23bP54728 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rad23bP54728 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rad23bP54728 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Rad23bP54728 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.46■□□□□ 0.87
Rad23bP54728 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rad23bP54728 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.46■□□□□ 0.87
Rad23bP54728 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Rad23bP54728 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rad23bP54728 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.46■□□□□ 0.87
Rad23bP54728 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rad23bP54728 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rad23bP54728 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rad23bP54728 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rad23bP54728 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rad23bP54728 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.45■□□□□ 0.86
Rad23bP54728 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.45■□□□□ 0.86
Rad23bP54728 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rad23bP54728 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.45■□□□□ 0.86
Rad23bP54728 Gm18421-201ENSMUST00000204122 625 ntBASIC20.45■□□□□ 0.86
Rad23bP54728 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.45■□□□□ 0.86
Rad23bP54728 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rad23bP54728 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms