Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Msh6P54276 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Msh6P54276 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.98■□□□□ 0.95
Msh6P54276 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.98■□□□□ 0.95
Msh6P54276 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.98■□□□□ 0.95
Msh6P54276 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.98■□□□□ 0.95
Msh6P54276 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.98■□□□□ 0.95
Msh6P54276 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.98■□□□□ 0.95
Msh6P54276 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Msh6P54276 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Msh6P54276 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Msh6P54276 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Msh6P54276 Gm11779-201ENSMUST00000118541 368 ntBASIC20.97■□□□□ 0.95
Msh6P54276 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Msh6P54276 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.97■□□□□ 0.95
Msh6P54276 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.97■□□□□ 0.95
Msh6P54276 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Gm5364-201ENSMUST00000216789 889 ntBASIC20.97■□□□□ 0.95
Msh6P54276 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.97■□□□□ 0.95
Msh6P54276 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Msh6P54276 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
Msh6P54276 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.96■□□□□ 0.95
Msh6P54276 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.96■□□□□ 0.95
Msh6P54276 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.96■□□□□ 0.95
Msh6P54276 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.96■□□□□ 0.95
Msh6P54276 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Msh6P54276 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.96■□□□□ 0.95
Msh6P54276 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Msh6P54276 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.96■□□□□ 0.95
Msh6P54276 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Msh6P54276 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Msh6P54276 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Gm11594-201ENSMUST00000122313 162 ntBASIC20.95■□□□□ 0.94
Msh6P54276 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Msh6P54276 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Msh6P54276 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Msh6P54276 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Msh6P54276 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.94■□□□□ 0.94
Msh6P54276 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.94■□□□□ 0.94
Msh6P54276 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Msh6P54276 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.94■□□□□ 0.94
Msh6P54276 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Msh6P54276 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms