Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.69■□□□□ 0.1
RoraP51448 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RoraP51448 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.68■□□□□ 0.1
RoraP51448 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RoraP51448 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.68■□□□□ 0.1
RoraP51448 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Gm15794-201ENSMUST00000120182 631 ntBASIC15.68■□□□□ 0.1
RoraP51448 Olfr129-201ENSMUST00000122318 993 ntBASIC15.68■□□□□ 0.1
RoraP51448 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.68■□□□□ 0.1
RoraP51448 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.68■□□□□ 0.1
RoraP51448 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.68■□□□□ 0.1
RoraP51448 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RoraP51448 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RoraP51448 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.67■□□□□ 0.1
RoraP51448 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.67■□□□□ 0.1
RoraP51448 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.67■□□□□ 0.1
RoraP51448 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RoraP51448 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.67■□□□□ 0.1
RoraP51448 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.67■□□□□ 0.1
RoraP51448 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.66■□□□□ 0.1
RoraP51448 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.66■□□□□ 0.1
RoraP51448 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RoraP51448 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RoraP51448 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.66■□□□□ 0.1
RoraP51448 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RoraP51448 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RoraP51448 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.65■□□□□ 0.1
RoraP51448 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.65■□□□□ 0.1
RoraP51448 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Gm44450-201ENSMUST00000199528 114 ntBASIC15.65■□□□□ 0.1
RoraP51448 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.65■□□□□ 0.1
RoraP51448 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RoraP51448 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RoraP51448 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RoraP51448 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.65■□□□□ 0.1
RoraP51448 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.65■□□□□ 0.1
RoraP51448 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RoraP51448 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RoraP51448 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RoraP51448 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.64■□□□□ 0.09
RoraP51448 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RoraP51448 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RoraP51448 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RoraP51448 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RoraP51448 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.64■□□□□ 0.09
RoraP51448 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms