Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-1P50220 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Mir6349-201ENSMUST00000184059 97 ntBASIC13.79□□□□□ -0.2
Nkx2-1P50220 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.79□□□□□ -0.2
Nkx2-1P50220 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Gm10602-201ENSMUST00000098239 609 ntBASIC13.79□□□□□ -0.2
Nkx2-1P50220 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-1P50220 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Gm11927-201ENSMUST00000118472 759 ntBASIC13.78□□□□□ -0.2
Nkx2-1P50220 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.78□□□□□ -0.2
Nkx2-1P50220 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx2-1P50220 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx2-1P50220 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gm5408-201ENSMUST00000197998 747 ntBASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.77□□□□□ -0.21
Nkx2-1P50220 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nkx2-1P50220 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-1P50220 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms