Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ercc3P49135 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.68■□□□□ 0.74
Ercc3P49135 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc3P49135 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.67■□□□□ 0.74
Ercc3P49135 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Ercc3P49135 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Gm11355-201ENSMUST00000121120 306 ntBASIC19.67■□□□□ 0.74
Ercc3P49135 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.67■□□□□ 0.74
Ercc3P49135 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ercc3P49135 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc3P49135 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Mir770-201ENSMUST00000103252 94 ntBASIC19.66■□□□□ 0.74
Ercc3P49135 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ercc3P49135 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.66■□□□□ 0.74
Ercc3P49135 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.66■□□□□ 0.74
Ercc3P49135 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ercc3P49135 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.66■□□□□ 0.74
Ercc3P49135 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc3P49135 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ercc3P49135 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ercc3P49135 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ercc3P49135 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.65■□□□□ 0.74
Ercc3P49135 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
Ercc3P49135 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ercc3P49135 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc3P49135 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ercc3P49135 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ercc3P49135 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.64■□□□□ 0.73
Ercc3P49135 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Gm44450-201ENSMUST00000199528 114 ntBASIC19.64■□□□□ 0.73
Ercc3P49135 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.64■□□□□ 0.73
Ercc3P49135 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ercc3P49135 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc3P49135 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ercc3P49135 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ercc3P49135 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.63■□□□□ 0.73
Ercc3P49135 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ercc3P49135 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.63■□□□□ 0.73
Ercc3P49135 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc3P49135 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ercc3P49135 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms