Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.58■□□□□ 0.56
Brca1P48754 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.58■□□□□ 0.56
Brca1P48754 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brca1P48754 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.57■□□□□ 0.56
Brca1P48754 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Brca1P48754 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.57■□□□□ 0.56
Brca1P48754 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Brca1P48754 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.57■□□□□ 0.56
Brca1P48754 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.57■□□□□ 0.56
Brca1P48754 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brca1P48754 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Brca1P48754 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Brca1P48754 Gm14701-201ENSMUST00000117156 348 ntBASIC18.56■□□□□ 0.56
Brca1P48754 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.56■□□□□ 0.56
Brca1P48754 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.56■□□□□ 0.56
Brca1P48754 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Brca1P48754 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.56■□□□□ 0.56
Brca1P48754 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.56■□□□□ 0.56
Brca1P48754 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Brca1P48754 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Brca1P48754 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Brca1P48754 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Brca1P48754 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.55■□□□□ 0.56
Brca1P48754 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.55■□□□□ 0.56
Brca1P48754 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.55■□□□□ 0.56
Brca1P48754 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Brca1P48754 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.54■□□□□ 0.56
Brca1P48754 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Brca1P48754 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.53■□□□□ 0.56
Brca1P48754 Mir6956-201ENSMUST00000183598 62 ntBASIC18.53■□□□□ 0.56
Brca1P48754 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.53■□□□□ 0.56
Brca1P48754 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Brca1P48754 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.53■□□□□ 0.56
Brca1P48754 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Brca1P48754 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
Brca1P48754 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.53■□□□□ 0.56
Brca1P48754 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Brca1P48754 Gm11764-201ENSMUST00000120221 623 ntBASIC18.53■□□□□ 0.56
Brca1P48754 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.53■□□□□ 0.56
Brca1P48754 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.53■□□□□ 0.56
Brca1P48754 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Brca1P48754 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Brca1P48754 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Brca1P48754 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.52■□□□□ 0.56
Brca1P48754 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.52■□□□□ 0.56
Brca1P48754 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.52■□□□□ 0.56
Brca1P48754 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.52■□□□□ 0.56
Brca1P48754 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.52■□□□□ 0.56
Brca1P48754 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.52■□□□□ 0.56
Brca1P48754 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Brca1P48754 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Brca1P48754 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Brca1P48754 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brca1P48754 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brca1P48754 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Brca1P48754 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms