Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TgfaP48030 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.38□□□□□ -0.11
TgfaP48030 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
TgfaP48030 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TgfaP48030 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.38□□□□□ -0.11
TgfaP48030 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.38□□□□□ -0.11
TgfaP48030 Psmb5-202ENSMUST00000227257 622 ntBASIC14.38□□□□□ -0.11
TgfaP48030 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TgfaP48030 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TgfaP48030 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TgfaP48030 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TgfaP48030 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.37□□□□□ -0.11
TgfaP48030 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TgfaP48030 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TgfaP48030 Gm12260-201ENSMUST00000122447 411 ntBASIC14.37□□□□□ -0.11
TgfaP48030 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.37□□□□□ -0.11
TgfaP48030 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TgfaP48030 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TgfaP48030 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TgfaP48030 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TgfaP48030 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TgfaP48030 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TgfaP48030 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Gm15173-201ENSMUST00000122049 433 ntBASIC14.36□□□□□ -0.11
TgfaP48030 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TgfaP48030 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Gm2756-201ENSMUST00000195851 400 ntBASIC14.36□□□□□ -0.11
TgfaP48030 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.36□□□□□ -0.11
TgfaP48030 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TgfaP48030 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.36□□□□□ -0.11
TgfaP48030 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TgfaP48030 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Gm25990-201ENSMUST00000102440 86 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.35□□□□□ -0.11
TgfaP48030 Gm7230-201ENSMUST00000173026 815 ntBASIC14.35□□□□□ -0.11
TgfaP48030 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Gm4535-201ENSMUST00000182274 558 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Gm43575-201ENSMUST00000196420 516 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.35□□□□□ -0.11
TgfaP48030 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.35□□□□□ -0.11
TgfaP48030 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.35□□□□□ -0.11
TgfaP48030 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Gm10355-201ENSMUST00000097146 517 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms