Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdh4P39038 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdh4P39038 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cdh4P39038 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cdh4P39038 AA414768-201ENSMUST00000121924 1257 ntBASIC15.88■□□□□ 0.13
Cdh4P39038 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdh4P39038 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.88■□□□□ 0.13
Cdh4P39038 Gm18115-201ENSMUST00000221209 621 ntBASIC15.88■□□□□ 0.13
Cdh4P39038 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdh4P39038 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdh4P39038 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdh4P39038 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh4P39038 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cdh4P39038 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Gm11336-201ENSMUST00000118168 334 ntBASIC15.87■□□□□ 0.13
Cdh4P39038 Gm9013-201ENSMUST00000132939 882 ntBASIC15.87■□□□□ 0.13
Cdh4P39038 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cdh4P39038 Gm25016-201ENSMUST00000158399 131 ntBASIC15.87■□□□□ 0.13
Cdh4P39038 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdh4P39038 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cdh4P39038 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdh4P39038 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdh4P39038 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.86■□□□□ 0.13
Cdh4P39038 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdh4P39038 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cdh4P39038 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdh4P39038 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.85■□□□□ 0.13
Cdh4P39038 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Cdh4P39038 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.85■□□□□ 0.13
Cdh4P39038 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Gm37722-201ENSMUST00000193757 208 ntBASIC15.85■□□□□ 0.13
Cdh4P39038 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.85■□□□□ 0.13
Cdh4P39038 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cdh4P39038 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cdh4P39038 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms