Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk2P38575 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Upk2P38575 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk2P38575 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk2P38575 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Upk2P38575 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Upk2P38575 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Upk2P38575 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Gm15565-201ENSMUST00000118890 427 ntBASIC14.55□□□□□ -0.08
Upk2P38575 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Upk2P38575 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.55□□□□□ -0.08
Upk2P38575 Gm10566-201ENSMUST00000086739 996 ntBASIC14.55□□□□□ -0.08
Upk2P38575 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.55□□□□□ -0.08
Upk2P38575 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.55□□□□□ -0.08
Upk2P38575 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.55□□□□□ -0.08
Upk2P38575 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Upk2P38575 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.54□□□□□ -0.08
Upk2P38575 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Mir6982-201ENSMUST00000184354 68 ntBASIC14.54□□□□□ -0.08
Upk2P38575 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.54□□□□□ -0.08
Upk2P38575 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.54□□□□□ -0.08
Upk2P38575 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.54□□□□□ -0.08
Upk2P38575 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Upk2P38575 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Upk2P38575 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Upk2P38575 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.53□□□□□ -0.08
Upk2P38575 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Upk2P38575 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Upk2P38575 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Upk2P38575 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Upk2P38575 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms