Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LdlrP35951 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
LdlrP35951 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LdlrP35951 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.52■□□□□ 0.24
LdlrP35951 Gm6659-201ENSMUST00000174752 547 ntBASIC16.52■□□□□ 0.24
LdlrP35951 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LdlrP35951 Gm37292-201ENSMUST00000192062 758 ntBASIC16.52■□□□□ 0.24
LdlrP35951 Gm10517-202ENSMUST00000192970 758 ntBASIC16.52■□□□□ 0.24
LdlrP35951 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LdlrP35951 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LdlrP35951 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
LdlrP35951 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LdlrP35951 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LdlrP35951 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LdlrP35951 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.52■□□□□ 0.23
LdlrP35951 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LdlrP35951 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LdlrP35951 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LdlrP35951 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.51■□□□□ 0.23
LdlrP35951 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LdlrP35951 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.51■□□□□ 0.23
LdlrP35951 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LdlrP35951 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LdlrP35951 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.51■□□□□ 0.23
LdlrP35951 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
LdlrP35951 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LdlrP35951 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.5■□□□□ 0.23
LdlrP35951 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LdlrP35951 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LdlrP35951 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.5■□□□□ 0.23
LdlrP35951 Gm11539-201ENSMUST00000119837 557 ntBASIC16.5■□□□□ 0.23
LdlrP35951 Gm13436-201ENSMUST00000120418 567 ntBASIC16.5■□□□□ 0.23
LdlrP35951 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.5■□□□□ 0.23
LdlrP35951 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.5■□□□□ 0.23
LdlrP35951 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.5■□□□□ 0.23
LdlrP35951 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.5■□□□□ 0.23
LdlrP35951 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LdlrP35951 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LdlrP35951 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
LdlrP35951 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LdlrP35951 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LdlrP35951 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LdlrP35951 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.49■□□□□ 0.23
LdlrP35951 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Gm12382-201ENSMUST00000122005 922 ntBASIC16.49■□□□□ 0.23
LdlrP35951 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Gm17661-201ENSMUST00000170317 270 ntBASIC16.49■□□□□ 0.23
LdlrP35951 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.49■□□□□ 0.23
LdlrP35951 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LdlrP35951 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.49■□□□□ 0.23
LdlrP35951 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms