Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.77■□□□□ 0.59
Col2a1P28481 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Col2a1P28481 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Col2a1P28481 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.76■□□□□ 0.59
Col2a1P28481 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Gm13418-201ENSMUST00000119097 944 ntBASIC18.76■□□□□ 0.59
Col2a1P28481 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.76■□□□□ 0.59
Col2a1P28481 Gm12350-201ENSMUST00000121208 462 ntBASIC18.76■□□□□ 0.59
Col2a1P28481 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.76■□□□□ 0.59
Col2a1P28481 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.76■□□□□ 0.59
Col2a1P28481 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col2a1P28481 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.75■□□□□ 0.59
Col2a1P28481 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Rarb-207ENSMUST00000225921 2756 ntBASIC18.75■□□□□ 0.59
Col2a1P28481 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.75■□□□□ 0.59
Col2a1P28481 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col2a1P28481 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col2a1P28481 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.74■□□□□ 0.59
Col2a1P28481 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.74■□□□□ 0.59
Col2a1P28481 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Gm11780-201ENSMUST00000136880 516 ntBASIC18.74■□□□□ 0.59
Col2a1P28481 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.74■□□□□ 0.59
Col2a1P28481 Gm6443-201ENSMUST00000203599 874 ntBASIC18.74■□□□□ 0.59
Col2a1P28481 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.74■□□□□ 0.59
Col2a1P28481 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.74■□□□□ 0.59
Col2a1P28481 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.74■□□□□ 0.59
Col2a1P28481 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col2a1P28481 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Col2a1P28481 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Col2a1P28481 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.73■□□□□ 0.59
Col2a1P28481 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.73■□□□□ 0.59
Col2a1P28481 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.73■□□□□ 0.59
Col2a1P28481 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Col2a1P28481 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col2a1P28481 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.72■□□□□ 0.59
Col2a1P28481 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col2a1P28481 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col2a1P28481 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.71■□□□□ 0.59
Col2a1P28481 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.71■□□□□ 0.59
Col2a1P28481 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.71■□□□□ 0.59
Col2a1P28481 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.71■□□□□ 0.59
Col2a1P28481 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.71■□□□□ 0.59
Col2a1P28481 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col2a1P28481 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms