Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccl6P27784 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.95□□□□□ -0.34
Ccl6P27784 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccl6P27784 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccl6P27784 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccl6P27784 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccl6P27784 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccl6P27784 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccl6P27784 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.94□□□□□ -0.34
Ccl6P27784 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.94□□□□□ -0.34
Ccl6P27784 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.94□□□□□ -0.34
Ccl6P27784 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl6P27784 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccl6P27784 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccl6P27784 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl6P27784 Mir6982-201ENSMUST00000184354 68 ntBASIC12.93□□□□□ -0.34
Ccl6P27784 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccl6P27784 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccl6P27784 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccl6P27784 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.93□□□□□ -0.34
Ccl6P27784 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl6P27784 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl6P27784 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl6P27784 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccl6P27784 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl6P27784 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ccl6P27784 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl6P27784 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ccl6P27784 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccl6P27784 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccl6P27784 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccl6P27784 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl6P27784 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms