Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tpm3P21107 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Tpm3P21107 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tpm3P21107 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.65■□□□□ 0.58
Tpm3P21107 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.65■□□□□ 0.58
Tpm3P21107 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.65■□□□□ 0.58
Tpm3P21107 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm3P21107 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm3P21107 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm3P21107 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tpm3P21107 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.64■□□□□ 0.57
Tpm3P21107 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Tpm3P21107 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm3P21107 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.63■□□□□ 0.57
Tpm3P21107 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tpm3P21107 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Tpm3P21107 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Tpm3P21107 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Tpm3P21107 Gm10033-202ENSMUST00000211874 928 ntBASIC18.63■□□□□ 0.57
Tpm3P21107 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm3P21107 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Tpm3P21107 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.62■□□□□ 0.57
Tpm3P21107 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tpm3P21107 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tpm3P21107 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tpm3P21107 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm3P21107 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tpm3P21107 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tpm3P21107 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Tpm3P21107 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
Tpm3P21107 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.61■□□□□ 0.57
Tpm3P21107 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tpm3P21107 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tpm3P21107 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm3P21107 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms