Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.26■□□□□ 0.51
Msh3P13705 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Msh3P13705 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Msh3P13705 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Msh3P13705 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Msh3P13705 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Msh3P13705 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.25■□□□□ 0.51
Msh3P13705 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.25■□□□□ 0.51
Msh3P13705 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Msh3P13705 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Gm10013-201ENSMUST00000106074 672 ntBASIC18.25■□□□□ 0.51
Msh3P13705 Gm11355-201ENSMUST00000121120 306 ntBASIC18.25■□□□□ 0.51
Msh3P13705 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.25■□□□□ 0.51
Msh3P13705 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh3P13705 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh3P13705 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.25■□□□□ 0.51
Msh3P13705 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.25■□□□□ 0.51
Msh3P13705 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.25■□□□□ 0.51
Msh3P13705 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Msh3P13705 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Msh3P13705 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Msh3P13705 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.23■□□□□ 0.51
Msh3P13705 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Msh3P13705 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.23■□□□□ 0.51
Msh3P13705 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.23■□□□□ 0.51
Msh3P13705 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Msh3P13705 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Msh3P13705 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Msh3P13705 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Msh3P13705 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.22■□□□□ 0.51
Msh3P13705 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Msh3P13705 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Msh3P13705 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.22■□□□□ 0.51
Msh3P13705 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms