Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rb1P13405 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rb1P13405 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rb1P13405 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Rb1P13405 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.93■□□□□ 0.3
Rb1P13405 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rb1P13405 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.93■□□□□ 0.3
Rb1P13405 Gm18958-201ENSMUST00000174258 762 ntBASIC16.93■□□□□ 0.3
Rb1P13405 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rb1P13405 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rb1P13405 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rb1P13405 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rb1P13405 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rb1P13405 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rb1P13405 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.92■□□□□ 0.3
Rb1P13405 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Rb1P13405 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.92■□□□□ 0.3
Rb1P13405 Gm11950-201ENSMUST00000121615 838 ntBASIC16.92■□□□□ 0.3
Rb1P13405 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rb1P13405 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rb1P13405 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rb1P13405 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.91■□□□□ 0.3
Rb1P13405 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Gm26039-201ENSMUST00000158152 144 ntBASIC16.91■□□□□ 0.3
Rb1P13405 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.91■□□□□ 0.3
Rb1P13405 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rb1P13405 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rb1P13405 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.9■□□□□ 0.3
Rb1P13405 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.9■□□□□ 0.3
Rb1P13405 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rb1P13405 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Rb1P13405 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rb1P13405 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rb1P13405 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rb1P13405 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms