Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.91■□□□□ 0.14
Cntn1P12960 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.91■□□□□ 0.14
Cntn1P12960 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.91■□□□□ 0.14
Cntn1P12960 Gm45328-201ENSMUST00000210942 917 ntBASIC15.91■□□□□ 0.14
Cntn1P12960 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.91■□□□□ 0.14
Cntn1P12960 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cntn1P12960 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.9■□□□□ 0.14
Cntn1P12960 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cntn1P12960 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.9■□□□□ 0.14
Cntn1P12960 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cntn1P12960 Gm18421-201ENSMUST00000204122 625 ntBASIC15.9■□□□□ 0.14
Cntn1P12960 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cntn1P12960 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.9■□□□□ 0.14
Cntn1P12960 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cntn1P12960 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.9■□□□□ 0.14
Cntn1P12960 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cntn1P12960 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.89■□□□□ 0.13
Cntn1P12960 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.89■□□□□ 0.13
Cntn1P12960 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.89■□□□□ 0.13
Cntn1P12960 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.89■□□□□ 0.13
Cntn1P12960 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Gm27742-201ENSMUST00000184667 60 ntBASIC15.89■□□□□ 0.13
Cntn1P12960 Gm17807-201ENSMUST00000186869 298 ntBASIC15.89■□□□□ 0.13
Cntn1P12960 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.89■□□□□ 0.13
Cntn1P12960 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.89■□□□□ 0.13
Cntn1P12960 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cntn1P12960 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Cntn1P12960 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.89■□□□□ 0.13
Cntn1P12960 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cntn1P12960 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cntn1P12960 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.88■□□□□ 0.13
Cntn1P12960 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cntn1P12960 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.88■□□□□ 0.13
Cntn1P12960 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.88■□□□□ 0.13
Cntn1P12960 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cntn1P12960 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cntn1P12960 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.88■□□□□ 0.13
Cntn1P12960 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cntn1P12960 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.87■□□□□ 0.13
Cntn1P12960 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.87■□□□□ 0.13
Cntn1P12960 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.87■□□□□ 0.13
Cntn1P12960 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cntn1P12960 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cntn1P12960 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms