Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm6089-201ENSMUST00000197666 938 ntBASIC17.66■□□□□ 0.42
Hoxc8P09025 Gm9172-201ENSMUST00000212092 954 ntBASIC17.66■□□□□ 0.42
Hoxc8P09025 Gm5364-201ENSMUST00000216789 889 ntBASIC17.66■□□□□ 0.42
Hoxc8P09025 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxc8P09025 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Psmb5-202ENSMUST00000227257 622 ntBASIC17.65■□□□□ 0.42
Hoxc8P09025 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxc8P09025 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxc8P09025 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxc8P09025 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Gm11779-201ENSMUST00000118541 368 ntBASIC17.64■□□□□ 0.41
Hoxc8P09025 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxc8P09025 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc8P09025 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.64■□□□□ 0.41
Hoxc8P09025 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.64■□□□□ 0.41
Hoxc8P09025 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxc8P09025 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Hoxc8P09025 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc8P09025 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Hoxc8P09025 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Mir6404-201ENSMUST00000183699 94 ntBASIC17.63■□□□□ 0.41
Hoxc8P09025 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.63■□□□□ 0.41
Hoxc8P09025 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxc8P09025 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.63■□□□□ 0.41
Hoxc8P09025 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxc8P09025 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc8P09025 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.62■□□□□ 0.41
Hoxc8P09025 Gm8000-201ENSMUST00000188378 592 ntBASIC17.62■□□□□ 0.41
Hoxc8P09025 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 AV026068-213ENSMUST00000223675 1171 ntBASIC17.62■□□□□ 0.41
Hoxc8P09025 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.62■□□□□ 0.41
Hoxc8P09025 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc8P09025 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxc8P09025 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxc8P09025 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Hoxc8P09025 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc8P09025 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc8P09025 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxc8P09025 Gm6550-201ENSMUST00000187574 993 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms