Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.56■□□□□ 0.08
Sod1P08228 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.56■□□□□ 0.08
Sod1P08228 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.56■□□□□ 0.08
Sod1P08228 Gm5364-201ENSMUST00000216789 889 ntBASIC15.56■□□□□ 0.08
Sod1P08228 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.56■□□□□ 0.08
Sod1P08228 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sod1P08228 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Sod1P08228 Gm4459-201ENSMUST00000118750 468 ntBASIC15.55■□□□□ 0.08
Sod1P08228 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.55■□□□□ 0.08
Sod1P08228 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.55■□□□□ 0.08
Sod1P08228 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Sod1P08228 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sod1P08228 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sod1P08228 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Sod1P08228 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Gm8097-201ENSMUST00000117903 829 ntBASIC15.54■□□□□ 0.08
Sod1P08228 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Gm8000-201ENSMUST00000188378 592 ntBASIC15.54■□□□□ 0.08
Sod1P08228 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.54■□□□□ 0.08
Sod1P08228 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sod1P08228 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sod1P08228 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sod1P08228 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Sod1P08228 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.53■□□□□ 0.08
Sod1P08228 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sod1P08228 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Sod1P08228 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.53■□□□□ 0.08
Sod1P08228 Gm15173-201ENSMUST00000122049 433 ntBASIC15.53■□□□□ 0.08
Sod1P08228 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.53■□□□□ 0.08
Sod1P08228 Gm11780-201ENSMUST00000136880 516 ntBASIC15.53■□□□□ 0.08
Sod1P08228 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.53■□□□□ 0.08
Sod1P08228 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.53■□□□□ 0.08
Sod1P08228 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.53■□□□□ 0.08
Sod1P08228 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sod1P08228 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sod1P08228 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sod1P08228 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Gm11779-201ENSMUST00000118541 368 ntBASIC15.52■□□□□ 0.08
Sod1P08228 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.52■□□□□ 0.08
Sod1P08228 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.52■□□□□ 0.08
Sod1P08228 Gm25406-201ENSMUST00000157599 105 ntBASIC15.52■□□□□ 0.08
Sod1P08228 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.52■□□□□ 0.08
Sod1P08228 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Gm6089-201ENSMUST00000197666 938 ntBASIC15.52■□□□□ 0.08
Sod1P08228 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.52■□□□□ 0.08
Sod1P08228 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Psmb5-202ENSMUST00000227257 622 ntBASIC15.52■□□□□ 0.08
Sod1P08228 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sod1P08228 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sod1P08228 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sod1P08228 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Sod1P08228 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sod1P08228 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sod1P08228 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Sod1P08228 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Sod1P08228 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms